Publications

Found 82 results
Author Title Type [ Year(Asc)]
Filters: Author is Eran Halperin  [Clear All Filters]
2014
Arkin, Y'ara., Rahmani E., Kleber M. E., Laaksonen R., März W., & Halperin E. (2014).  EPIQ—Efficient Detection of SNP–SNP Epistatic Interactions for Quantitative Traits. Bioinformatics. 30(12), i19-i25.
Rozov, R., Shamir R., & Halperin E. (2014).  Fast Lossless Compression via Cascading Bloom Filters. 15,
Shem-Tov, D., & Halperin E. (2014).  Historical Pedigree Reconstruction from Extant Populations Using PArtitioning of RElatives (PREPARE). PLoS Computational Biology. 10(6), 
2013
Gymrek, M., McGuire A. L., Golan D., Halperin E., & Erlich Y. (2013).  Identifying Personal Genomes by Surname Inference. Science. 339(6117), 321-324.
Töpfer, A., Zagordi O., Prabhakaran S., Roth V., Halperin E., & Beerenwinkel N. (2013).  Probabilistic Inference of Viral Quasispecies Subject to Recombination. Journal of Computational Biology. 20(2), 113-123.
2012
Wang, Z., Hormozdiari F., Yang W-Y., Halperin E., & Eskin E. (2012).  CNVeM: Copy Number Variation Detection Using Uncertainty of Read Mapping. 326-340.
Slager, S.. L., Skibola C. F., & Halperin E. (2012).  Common Variation at 6p21.31 (BAK1) Influences the Risk of Chronic Lymphocytic Leukemia. Blood. 120(4), 843-846.
Baran, Y., Pasaniuc B., Sankararaman S., Torgerson D. G., Gignoux C., Eng C., et al. (2012).  Fast and Accurate Inference of Local Ancestry in Latino Populations. Bioinformatics. 28(10), 1359-1367.
Efros, A., & Halperin E. (2012).  Haplotype Reconstruction Using Perfect Phylogeny and Sequence Data. 13,
Baran, Y., & Halperin E. (2012).  Joint Analysis of Multiple Metagenomic Samples. PLoS Computational Biology. 8(2), 
Rozov, R., Halperin E., & Shamir R. (2012).  MGMR: Leveraging RNA-Seq Population Data to Optimize Expression Estimation. 13,
Yang, W-Y., Novembre J., Eskin E., & Halperin E. (2012).  A Model-Based Approach for Analysis of Spatial Structure in Genetic Data. Nature Genetics. 44, 725-731.
Yang, W-Y., Novembre J., Eskin E., & Halperin E. (2012).  A Model-Based Approach for Analysis of Spatial Structure in Genetic Data.
Yang, W-Y., Novembre J., Eskin E., & Halperin E. (2012).  A Model-Based Approach for Analysis of Spatial Structure in Genetic Data. Nature Genetics. 44, 725-731.
Zagordi, O., Töpfer A., Prabhakaran S., Roth V., Halperin E., & Beerenwinkel N. (2012).  Probabilistic Inference of Viral Quasispecies Subject to Recombination. 342-354.
2011
Pasaniuc, B., Zaitlen N., & Halperin E. (2011).  Accurate Estimation of Expression Levels of Homologous Genes in RNA-Seq Experiments. 18(3), 459-468.
Kovacs, A.., Ben-Jacob N.., Tayem H.., Halperin E., Iraqi F.. A., & Gophna U.. (2011).  Genotype Is a Stronger Determinant than Sex of the Mouse Gut Microbiota. Microbial Ecology. 61(2), 423-428.
He, D., Zaitlen N., Pasaniuc B., Eskin E., & Halperin E. (2011).  Genotyping Common and Rare Variation Using Overlapping Pool Sequencing. BMC Informatics. 12,
He, D., Zaitlen N., Pasaniuc B., Eskin E., & Halperin E. (2011).  Genotyping Common and Rare Variation Using Overlapping Pool Sequencing. Proceedings of the First Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq). 26-27.
Wang, J., Geesman G. J., Hostikka S. Liisa, Atallah M., Blackwell B., Lee E., et al. (2011).  Inhibition of Activated Pericentromeric SINE/Alu Repeat Transcription in Senescent Human Adult Stem Cells Reinstates Self-Renewal. Cell Cycle. 10(17), 3016-3030.
Conde, L., Bevan S.., Sitzer M.., Klopp N.., Illig T.., Thiery J.., et al. (2011).  Novel Associations for Coronary Artery Disease Derived from Genome Wide Association Studies Are Not Associated with Increased Carotid Intima-Media Thickness..... Atherosclerosis. 219(2), 684-689.
Kirkpatrick, B., Li S. Cheng, Karp R. M., & Halperin E. (2011).  Pedigree Reconstruction Using Identity by Descent. 136-152.
Kirkpatrick, B., Li S. Cheng, Karp R. M., & Halperin E. (2011).  Pedigree Reconstruction Using Identity by Descent. Journal of Computational Biology. 18(11), 1481-1493.
Conde, L., Bracci P. M., Halperin E., & Skibola C. F. (2011).  A Search for Overlapping Genetic Susceptibility Loci Between Non-Hodgkin Lymphoma and Autoimmune Diseases. Genomics. 98(1), 9-14.
2010
Pasaniuc, B., Zaitlen N., & Halperin E. (2010).  Accurate Estimation of Expression Levels of Homologous Genes in RNA-Seq Experiments. 397-409.

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